| Ident. | Authors (with country if any) | Title |
|---|
| 000265 (2020) |
Megan L. Matthews [États-Unis] ; Jack P. Wang [République populaire de Chine, États-Unis] ; Ronald Sederoff [États-Unis] ; Vincent L. Chiang [République populaire de Chine, États-Unis] ; Cranos M. Williams [États-Unis] | Modeling cross-regulatory influences on monolignol transcripts and proteins under single and combinatorial gene knockdowns in Populus trichocarpa. |
| 000296 (2020) |
Zhonghai Li [République populaire de Chine] ; Yang Zhang [République populaire de Chine] ; Dong Zou [République populaire de Chine] ; Yi Zhao [République populaire de Chine] ; Hou-Ling Wang [République populaire de Chine] ; Yi Zhang [République populaire de Chine] ; Xinli Xia [République populaire de Chine] ; Jingchu Luo [République populaire de Chine] ; Hongwei Guo [République populaire de Chine] ; Zhang Zhang [République populaire de Chine] | LSD 3.0: a comprehensive resource for the leaf senescence research community. |
| 000379 (2020) |
Cun Chen [République populaire de Chine] ; Yanguang Chu [République populaire de Chine] ; Changjun Ding [République populaire de Chine] ; Xiaohua Su [République populaire de Chine] ; Qinjun Huang [République populaire de Chine] | Genetic diversity and population structure of black cottonwood (Populus deltoides) revealed using simple sequence repeat markers. |
| 000639 (2019) |
Qari Muhammad Imran [Corée du Sud] ; Sang-Uk Lee [Corée du Sud] ; Bong-Gyu Mun [Corée du Sud] ; Adil Hussain [Pakistan] ; Sajjad Asaf [Oman] ; In-Jung Lee [Corée du Sud] ; Byung-Wook Yun [Corée du Sud] | WRKYs, the Jack-of-various-Trades, Modulate Dehydration Stress in Populus davidiana-A Transcriptomic Approach. |
| 000741 (2019) |
Ewa M. Kalemba [Pologne] ; Ewelina Stolarska [Pologne] | Regulation of Gene Expression of Methionine Sulfoxide Reductases and Their New Putative Roles in Plants. |
| 000801 (2019) |
Tatianne Da Costa Negri [Brésil] ; Wonder Alexandre Luz Alves [Brésil] ; Pedro Henrique Bugatti [Brésil] ; Priscila Tiemi Maeda Saito [Brésil] ; Douglas Silva Domingues [Brésil] ; Alexandre Rossi Paschoal [Brésil] | Pattern recognition analysis on long noncoding RNAs: a tool for prediction in plants. |
| 000E37 (2018) |
Esra Nurten Yer [Turquie] ; Mehmet Cengiz Baloglu [Turquie] ; Sezgin Ayan [Turquie] | Identification and expression profiling of all Hsp family member genes under salinity stress in different poplar clones. |
| 000F17 (2018) |
Thibaut Capblancq [France] ; Keurcien Luu [France] ; Michael G B. Blum [France] ; Eric Bazin [France] | Evaluation of redundancy analysis to identify signatures of local adaptation. |
| 001258 (2017) |
Kazutaka Kusunoki [Japon] ; Yoshiharu Y. Yamamoto [Japon] | Plant Promoter Database (PPDB). |
| 001424 (2017) |
Pian Rao [République populaire de Chine] ; Zhong Chen [République populaire de Chine] ; Xiaoyu Yang [République populaire de Chine] ; Kai Gao [République populaire de Chine] ; Xiong Yang [République populaire de Chine] ; Tianyun Zhao [République populaire de Chine] ; Siyan Li [République populaire de Chine] ; Bo Wu [République populaire de Chine] ; Xinmin An [République populaire de Chine, États-Unis] | Dynamic transcriptomic analysis of the early response of female flowers of Populus alba × P. glandulosa to pollination. |
| 001439 (2017) |
Salvatore Montella [Italie] ; Valeria Ventorino [Italie] ; Vincent Lombard [France] ; Bernard Henrissat [France, Arabie saoudite] ; Olimpia Pepe [Italie] ; Vincenza Faraco [Italie] | Discovery of genes coding for carbohydrate-active enzyme by metagenomic analysis of lignocellulosic biomasses. |
| 001715 (2016) |
Qi Liu [République populaire de Chine] ; Changjun Ding [République populaire de Chine] ; Yanguang Chu [République populaire de Chine] ; Jiafei Chen [République populaire de Chine] ; Weixi Zhang [République populaire de Chine] ; Bingyu Zhang [République populaire de Chine] ; Qinjun Huang [République populaire de Chine] ; Xiaohua Su [République populaire de Chine] | PoplarGene: poplar gene network and resource for mining functional information for genes from woody plants. |
| 001823 (2016) |
Xujun Ma [République populaire de Chine] ; Chao Zhang [République populaire de Chine] ; Bing Zhang [République populaire de Chine] ; Chuanping Yang [République populaire de Chine] ; Shujuan Li [République populaire de Chine] | Identification of genes regulated by histone acetylation during root development in Populus trichocarpa. |
| 001842 (2016) |
Marcela Karey Tello-Ruiz [États-Unis] ; Joshua Stein [États-Unis] ; Sharon Wei [États-Unis] ; Ken Youens-Clark [États-Unis] ; Pankaj Jaiswal [États-Unis] ; Doreen Ware [États-Unis] | Gramene: A Resource for Comparative Analysis of Plants Genomes and Pathways. |
| 001D85 (2015) |
Hou-Ling Wang [République populaire de Chine] ; Lan Li [République populaire de Chine] ; Sha Tang [République populaire de Chine] ; Chao Yuan [République populaire de Chine] ; Qianqian Tian [République populaire de Chine] ; Yanyan Su [République populaire de Chine] ; Hui-Guang Li [République populaire de Chine] ; Lin Zhao [République populaire de Chine] ; Weilun Yin [République populaire de Chine] ; Rui Zhao [République populaire de Chine] ; Xinli Xia [République populaire de Chine] | Evaluation of Appropriate Reference Genes for Reverse Transcription-Quantitative PCR Studies in Different Tissues of a Desert Poplar via Comparision of Different Algorithms. |
| 002037 (2014) |
Meixia Ye ; Zhong Chen ; Xiaoxing Su ; Lexiang Ji ; Jia Wang ; Weihua Liao ; Huandi Ma ; Xinmin An [République populaire de Chine] | Study of seed hair growth in Populus tomentosa, an important character of female floral bud development. |
| 002173 (2014) |
Xi Hong Sun [République populaire de Chine] ; Ling Ping Zhao ; Quan Zou ; Zhan Bin Wang | Identification of microRNA genes and their mRNA targets in Festuca arundinacea. |
| 002182 (2014) |
Z J Chen [République populaire de Chine] ; Z M Cao [République populaire de Chine] ; Z D Yu [République populaire de Chine] | Identification and characterization of differentially expressed genes during incompatible interaction between the foliar rust Melampsora larici-populina and poplar. |
| 002310 (2014) |
Vikas Belamkar ; Nathan T. Weeks ; Arvind K. Bharti ; Andrew D. Farmer ; Michelle A. Graham ; Steven B. Cannon [États-Unis] | Comprehensive characterization and RNA-Seq profiling of the HD-Zip transcription factor family in soybean (Glycine max) during dehydration and salt stress. |
| 002346 (2014) |
Evgeny E. Akkuratov [États-Unis] ; Lorraine Walters [États-Unis] ; Arnab Saha-Mandal [États-Unis] ; Sushant Khandekar [États-Unis] ; Erin Crawford [États-Unis] ; Craig L. Zirbel [États-Unis] ; Scott Leisner [États-Unis] ; Ashwin Prakash [États-Unis] ; Larisa Fedorova [États-Unis] ; Alexei Fedorov [États-Unis] | Bioinformatics analysis of plant orthologous introns: identification of an intronic tRNA-like sequence. |
| 002384 (2014) |
Erik K. Malm [Suède] ; Vaibhav Srivastava [Suède] ; Gustav Sundqvist [Suède] ; Vincent Bulone [Suède] | APP: an Automated Proteomics Pipeline for the analysis of mass spectrometry data based on multiple open access tools. |
| 002527 (2013) |
Eli Rodgers-Melnick [États-Unis] ; Mark Culp ; Stephen P. Difazio | Predicting whole genome protein interaction networks from primary sequence data in model and non-model organisms using ENTS. |
| 002543 (2013) |
Bhanu Rekapalli [États-Unis] ; Paul Giblock ; Christopher Reardon | PoPLAR: Portal for Petascale Lifescience Applications and Research. |
| 002550 (2013) |
Zhanchao Wang [République populaire de Chine] ; Haizhen Zhang ; Jingli Yang ; Yunlin Chen ; Xuemei Xu ; Xuliang Mao ; Chenghao Li | Phylogenetic, expression, and bioinformatic analysis of the ABC1 gene family in Populus trichocarpa. |
| 002986 (2012) |
Hai-Ling Yang [République populaire de Chine] ; Yan-Jing Liu ; Cai-Ling Wang ; Qing-Yin Zeng | Molecular evolution of trehalose-6-phosphate synthase (TPS) gene family in Populus, Arabidopsis and rice. |
| 002A70 (2012) |
Chunfang Zheng [Canada] ; David Sankoff | Gene order in rosid phylogeny, inferred from pairwise syntenies among extant genomes. |
| 002C56 (2011) |
Peter E. Larsen [États-Unis] ; Avinash Sreedasyam ; Geetika Trivedi ; Gopi K. Podila ; Leland J. Cseke ; Frank R. Collart | Using next generation transcriptome sequencing to predict an ectomycorrhizal metabolome. |
| 002D54 (2011) |
Ping Xuan [République populaire de Chine] ; Maozu Guo ; Xiaoyan Liu ; Yangchao Huang ; Wenbin Li ; Yufei Huang | PlantMiRNAPred: efficient classification of real and pseudo plant pre-miRNAs. |
| 003106 (2010) |
Qin Xu [États-Unis] ; Xia Ye ; Li-Yan Li ; Zong-Ming Cheng ; Hong Guo | Structural basis for the action of xyloglucan endotransglycosylases/hydrolases: insights from homology modeling. |
| 003177 (2010) |
Zhenhai Zhang [République populaire de Chine] ; Jingyin Yu ; Daofeng Li ; Zuyong Zhang ; Fengxia Liu ; Xin Zhou ; Tao Wang ; Yi Ling ; Zhen Su | PMRD: plant microRNA database. |
| 003186 (2010) |
P R K. Ingvarsson [Suède] | Natural selection on synonymous and nonsynonymous mutations shapes patterns of polymorphism in Populus tremula. |
| 003337 (2010) |
Yoshiyuki Ogata [Japon] ; Hideyuki Suzuki ; Nozomu Sakurai ; Daisuke Shibata | CoP: a database for characterizing co-expressed gene modules with biological information in plants. |
| 003467 (2009) |
Andreas Sjödin [Suède] ; Nathaniel Robert Street ; Göran Sandberg ; Petter Gustafsson ; Stefan Jansson | The Populus Genome Integrative Explorer (PopGenIE): a new resource for exploring the Populus genome. |
| 003584 (2009) |
Max Bylesjö [Suède] ; Robert Nilsson ; Vaibhav Srivastava ; Andreas Grönlund ; Annika I. Johansson ; Steffan Jansson ; Jan Karlsson ; Thomas Moritz ; Gunnar Wingsle ; Johan Trygg | Integrated analysis of transcript, protein and metabolite data to study lignin biosynthesis in hybrid aspen. |
| 003676 (2009) |
Dandan Song [République populaire de Chine] ; Yang Yang ; Bin Yu ; Binglian Zheng ; Zhidong Deng ; Bao-Liang Lu ; Xuemei Chen ; Tao Jiang | Computational prediction of novel non-coding RNAs in Arabidopsis thaliana. |
| 003756 (2008) |
Timothy E. Gookin [États-Unis] ; Junhyong Kim ; Sarah M. Assmann | Whole proteome identification of plant candidate G-protein coupled receptors in Arabidopsis, rice, and poplar: computational prediction and in-vivo protein coupling. |
| 003922 (2008) |
Eric Lyons [États-Unis] ; Brent Pedersen ; Josh Kane ; Maqsudul Alam ; Ray Ming ; Haibao Tang ; Xiyin Wang ; John Bowers ; Andrew Paterson ; Damon Lisch ; Michael Freeling | Finding and comparing syntenic regions among Arabidopsis and the outgroups papaya, poplar, and grape: CoGe with rosids. |
| 003995 (2008) |
Huaizhen Qin [États-Unis] ; Tao Feng ; Scott A. Harding ; Chung-Jui Tsai ; Shuanglin Zhang | An efficient method to identify differentially expressed genes in microarray experiments. |
| 003C13 (2007) |
Helge Küster [Allemagne] ; Anke Becker ; Christian Firnhaber ; Natalija Hohnjec ; Katja Manthey ; Andreas M. Perlick ; Thomas Bekel ; Michael Dondrup ; Kolja Henckel ; Alexander Goesmann ; Folker Meyer ; Daniel Wipf ; Natalia Requena ; Ulrich Hildebrandt ; Rüdiger Hampp ; Uwe Nehls ; Franziska Krajinski ; Philipp Franken ; Alfred Pühler | Development of bioinformatic tools to support EST-sequencing, in silico- and microarray-based transcriptome profiling in mycorrhizal symbioses. |
| 003C15 (2007) |
Max Bylesjö [Suède] ; Daniel Eriksson ; Miyako Kusano ; Thomas Moritz ; Johan Trygg | Data integration in plant biology: the O2PLS method for combined modeling of transcript and metabolite data. |
| 003E11 (2006) |
Kris Morreel [Belgique] ; Geert Goeminne ; Véronique Storme ; Lieven Sterck ; John Ralph ; Wouter Coppieters ; Peter Breyne ; Marijke Steenackers ; Michel Georges ; Eric Messens ; Wout Boerjan | Genetical metabolomics of flavonoid biosynthesis in Populus: a case study. |
| 004024 (2005) |
George S. Yang [Canada] ; Jeffery M. Stott ; Duane Smailus ; Sarah A. Barber ; Miruna Balasundaram ; Marco A. Marra ; Robert A. Holt | High-throughput sequencing: a failure mode analysis. |
| 004041 (2005) |
Sabine André [Allemagne] ; Hans-Christian Siebert ; Mitsuru Nishiguchi ; Kiyoshi Tazaki ; Hans-Joachim Gabius | Evidence for lectin activity of a plant receptor-like protein kinase by application of neoglycoproteins and bioinformatic algorithms. |
